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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 4037.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 4613.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 6975.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3169.3
Min RPKM: 274.8
Std RPKM: 390.5
Median RPKM: 814.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
3169.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
2058.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
2006.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1949.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
1933.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
1815.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1766.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
1705.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
1688.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
1634.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
1625.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
1589.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
1521.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
1489.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1484.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
1469.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
1451.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
1428.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
1428.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
1390.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
1387.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
1385.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1369.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
1341.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
1334.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
1321.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
1313.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
1312.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1260.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
1260.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
1247.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
1243.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1230.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
1223.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
1220.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
1205.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
1203.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
1196.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
1170.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
1162.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
1157.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
1150.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
1140.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1140.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
1136.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
1132.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
1130.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
1126.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1122.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
1115.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
1113.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1110.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
1109.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
1100.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
1099.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
1095.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
1095.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
1089.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
1088.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
1087.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1079.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
1078.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
1071.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1059.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
1055.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
1052.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
1046.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
1036.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1027.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
1026.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
1021.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
1016.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1015.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
1015.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1001.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
975.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
972.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
969.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
956.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
945.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
936.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
936.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
930.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
925.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
921.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
912.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
902.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
902.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
900.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
898.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
889.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
886.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
885.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
883.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
881.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
878.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
877.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
875.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
864.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
860.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
848.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
835.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
832.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
829.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
821.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
816.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
815.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
813.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
795.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
792.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
785.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
779.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
778.0
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
775.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
774.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
774.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
774.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
771.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
769.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
768.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
767.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
765.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
763.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
760.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
746.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
746.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
744.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
742.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
740.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
740.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
736.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
731.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
730.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
729.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
727.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
725.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
713.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
712.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
710.4
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
702.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
697.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
694.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
687.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
686.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
682.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
678.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
668.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
666.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
663.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
650.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
649.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
635.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
634.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
625.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
625.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
624.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
621.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
616.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
615.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
615.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
604.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
600.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
599.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
592.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
587.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
583.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
583.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
582.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
582.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
576.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
569.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
568.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
548.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
548.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
545.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
540.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
538.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
534.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
532.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
532.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
528.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
520.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
520.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
508.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
506.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
497.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
496.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
496.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
494.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
488.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
488.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
487.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
484.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
473.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
469.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
450.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
441.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
438.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
436.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
434.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
430.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
419.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
417.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
410.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
397.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
387.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
373.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
357.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
353.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
344.8
GTEX-QEL4-2126-SM-447AE
50-59 years, male
339.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
330.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
279.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
274.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.