Fields »
ABOUTMENU
HELP
NEWS
KCTD5
COLON - Expression summary
RNA expressioni
HPA:22.5TPM
GTEx:8.9RPKM
FANTOM5:41.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 22.5
overview Male, age 54 Sample 1
TPM: 23.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 29.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 29.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 34.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 14.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 16.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 17.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 23.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 26.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 21.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 21.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 18.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 8.9
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 5.3
Samples: 149

Max RPKM: 7.6
Min RPKM: 3.6
Std RPKM: 0.7
Median RPKM: 5.3
GTEX-XBED-1726-SM-47JYO 60-69 years, male 7.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 7.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 7.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 7.1
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 6.8
GTEX-12696-1926-SM-5EGJT 60-69 years, male 6.7
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 6.7
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 6.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 6.6
GTEX-V955-1726-SM-4JBHF 60-69 years, male 6.5
Show all
Colon - Transverse
RPKM: 11.5
Samples: 196

Max RPKM: 27.7
Min RPKM: 3.4
Std RPKM: 5.4
Median RPKM: 11.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 27.7
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 27.6
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 25.5
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 24.1
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 22.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 22.3
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 21.6
GTEX-QLQW-0426-SM-447A7 30-39 years, male 21.5
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 21.4
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 20.5
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 41.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 55.2
FF:10014-101C5 62,83,84 years, mixed 41.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.