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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 335.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 148.0
Min RPKM: 51.5
Std RPKM: 18.5
Median RPKM: 102.8
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
148.0
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
139.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
139.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
138.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
136.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
133.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
130.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
127.6
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
127.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
126.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
124.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
124.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
122.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
120.6
GTEX-X585-3026-SM-46MWF
50-59 years, male
120.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
119.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
119.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
117.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
117.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
116.2
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
115.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
115.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
115.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
115.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
115.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
114.6
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
114.4
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
114.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
113.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
113.1
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
112.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
111.6
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
111.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
109.7
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
109.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
109.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
108.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
107.8
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
107.7
GTEX-WL46-2926-SM-3LK82
50-59 years, male
107.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
107.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
107.4
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
107.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
106.9
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
106.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
106.7
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
106.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
106.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
106.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
106.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
105.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
104.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
104.1
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
103.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
103.4
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
103.2
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
103.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
102.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
102.2
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
101.9
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
101.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
101.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
100.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
100.2
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
100.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
100.1
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
100.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
99.9
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
99.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
99.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
98.6
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
98.0
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
97.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
96.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
94.4
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
94.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
93.6
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
93.4
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
93.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
92.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
92.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
91.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
91.2
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
90.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
90.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
90.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
89.3
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
88.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
88.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
87.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
87.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
86.9
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
86.5
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
86.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
85.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
81.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
81.1
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
81.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
80.4
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
76.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
75.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
75.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
74.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
74.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
74.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
73.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
73.7
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
71.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
67.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
67.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
63.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
58.2
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
57.0
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
51.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 121.2
Samples: 108
Max RPKM: 206.0
Min RPKM: 37.6
Std RPKM: 29.4
Median RPKM: 123.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
206.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
201.6
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
190.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
173.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
170.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
169.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
168.8
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
168.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
155.3
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
154.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
150.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
148.5
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
147.4
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
146.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
145.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
145.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
144.4
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
144.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
144.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
144.2
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
143.7
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
143.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
141.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
141.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
141.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
138.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
138.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
137.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
136.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
135.9
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
134.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
134.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
133.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
133.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
133.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
132.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
132.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
131.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
131.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
130.6
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
130.0
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
129.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
129.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
129.5
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
129.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
129.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
128.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
128.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
126.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
125.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
124.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
124.8
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
124.7
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
124.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
123.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
122.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
122.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
121.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
121.3
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
121.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
121.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
120.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
119.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
117.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
117.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
116.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
116.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
115.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
114.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
114.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
113.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
112.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
112.4
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
112.0
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
111.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
111.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
110.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
109.5
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
106.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
106.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
103.8
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
102.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
102.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
102.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
101.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
101.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
100.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
99.4
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
99.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
98.2
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
92.2
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
91.2
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
89.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
87.7
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
87.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
82.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
81.4
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
79.9
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
79.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
78.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
72.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
71.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
71.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
69.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
57.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
54.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
49.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
37.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.