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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 21.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 4.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 4.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 632.1
Min RPKM: 4.0
Std RPKM: 88.3
Median RPKM: 76.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
632.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
444.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
393.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
392.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
341.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
339.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
324.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
315.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
299.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
297.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
281.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
280.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
273.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
251.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
235.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
229.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
226.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
223.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
212.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
204.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
197.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
196.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
191.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
191.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
188.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
185.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
183.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
183.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
178.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
177.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
177.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
177.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
163.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
161.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
159.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
159.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
156.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
155.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
154.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
152.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
151.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
149.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
148.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
147.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
146.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
134.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
132.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
132.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
131.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
128.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
127.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
127.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
125.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
123.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
123.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
122.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
122.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
122.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
121.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
120.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
118.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
118.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
116.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
116.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
114.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
112.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
112.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
112.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
110.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
110.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
109.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
108.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
108.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
106.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
104.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
104.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
103.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
101.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
101.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
100.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
99.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
99.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
96.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
96.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
95.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
94.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
93.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
93.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
93.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
92.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
91.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
91.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
91.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
89.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
89.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
88.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
88.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
80.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
80.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
80.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
80.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
79.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
79.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
78.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
78.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
77.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
76.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
75.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
75.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
75.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
73.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
72.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
70.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
69.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
68.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
67.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
67.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
66.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
65.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
64.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
64.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
63.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
61.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
60.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
60.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
60.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
59.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
59.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
59.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
59.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
59.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
58.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
57.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
56.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
55.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
55.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
54.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
53.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
52.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
52.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
51.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
51.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
50.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
50.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
48.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
47.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
46.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
46.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
46.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
45.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
45.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
45.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
45.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
44.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
43.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
43.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
41.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
41.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
41.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
38.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
38.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
37.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
35.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
34.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
34.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
32.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
32.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
31.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
30.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
30.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
29.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
29.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
29.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
28.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
28.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
27.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
27.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
27.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
26.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
26.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
25.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
25.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
23.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
22.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
22.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
22.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
21.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
20.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
20.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
19.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
19.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
18.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
18.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
16.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
16.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
15.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
14.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
13.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
12.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
11.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
10.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
10.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
9.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
9.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
9.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
8.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
7.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
7.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
6.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
6.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
5.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
5.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
4.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
4.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.