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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 14005.6
Min RPKM: 0.3
Std RPKM: 2027.0
Median RPKM: 77.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
14005.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
7349.6
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
6801.5
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
5542.5
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
4956.9
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
4875.6
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
4230.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
3768.3
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
3126.0
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
2906.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
2853.3
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
2635.1
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
2422.9
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
2372.0
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
2136.9
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
2121.9
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
2056.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
2045.1
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
1785.9
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
1600.7
GTEX-11I78-2026-SM-5987C
50-59 years, female
1546.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
1265.4
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
1201.5
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
1154.0
GTEX-S341-1226-SM-4AD5S
40-49 years, female
1091.1
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
980.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
900.0
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
876.0
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
677.0
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
667.7
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
607.8
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
549.4
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
432.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
419.9
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
393.2
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
284.7
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
256.3
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
249.7
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
242.0
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
180.7
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
167.8
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
138.1
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
125.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
113.5
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
106.8
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
91.4
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
85.9
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
78.2
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
76.1
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
61.6
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
61.3
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
60.0
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
48.3
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
39.1
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
31.5
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
25.9
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
25.4
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
18.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
13.1
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
12.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
10.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
10.2
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
9.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
9.2
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
8.5
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
7.9
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
7.7
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
6.7
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
5.4
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
5.4
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
5.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
4.6
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
4.6
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
3.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
3.3
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
3.0
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
2.7
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
2.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
2.6
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
2.4
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
2.4
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
2.3
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
2.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
2.1
GTEX-QCQG-1226-SM-48U23
50-59 years, female
2.0
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
1.9
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
1.8
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
1.7
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
1.3
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
1.1
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
1.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
1.1
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
1.1
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.5
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.4
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
0.3
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.