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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 139.1
Min RPKM: 0.0
Std RPKM: 31.2
Median RPKM: 23.8
GTEX-11I78-2026-SM-5987C
50-59 years, female
139.1
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
116.1
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
113.8
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
112.6
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
90.6
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
89.1
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
83.1
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
81.4
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
80.4
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
80.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
69.2
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
66.2
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
64.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
59.8
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
59.4
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
58.4
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
53.2
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
53.2
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
52.6
GTEX-S341-1226-SM-4AD5S
40-49 years, female
52.4
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
51.0
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
50.3
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
49.8
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
48.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
46.8
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
46.4
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
46.2
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
44.2
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
44.1
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
43.4
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
42.7
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
42.6
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
40.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
40.1
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
39.5
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
37.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
35.6
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
33.8
GTEX-QCQG-1226-SM-48U23
50-59 years, female
33.4
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
31.2
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
30.9
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
29.4
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
28.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
27.0
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
25.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
24.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
24.3
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
23.9
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
23.7
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
23.0
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
18.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
16.7
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
16.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
16.1
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
15.6
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
13.9
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
13.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
13.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
12.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
12.0
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
10.1
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
9.3
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
8.9
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
7.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
7.2
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
6.5
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
6.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
6.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
4.3
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
3.9
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
3.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
3.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
3.1
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
1.5
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.6
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
0.5
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
0.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
0.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.4
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
0.4
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.3
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
0.3
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
0.3
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.2
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.1
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
0.1
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
0.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.1
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
0.1
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
0.1
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
0.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.0
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
0.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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