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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 51.4
Min RPKM: 2.5
Std RPKM: 13.6
Median RPKM: 13.6
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
51.4
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
50.0
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
49.6
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
49.0
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
48.1
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
45.2
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
37.2
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
37.0
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
34.8
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
30.6
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
28.4
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
28.2
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
27.7
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
27.4
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
26.9
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
26.3
GTEX-X261-2426-SM-4PQZU
50-59 years, male
26.2
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
25.6
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
25.3
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
25.2
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
24.3
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
24.2
GTEX-11P82-0926-SM-5986X
20-29 years, male
22.3
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
22.1
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
21.6
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
21.6
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
18.0
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
17.2
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
13.6
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
12.9
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
12.0
GTEX-Y111-2626-SM-4TT24
50-59 years, male
12.0
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
11.5
GTEX-13O21-1926-SM-5MR39
50-59 years, male
11.0
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
10.9
GTEX-13113-1526-SM-5EGHV
60-69 years, female
10.8
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
10.6
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
10.5
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
10.4
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
10.2
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
9.7
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
9.0
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
8.4
GTEX-1445S-2926-SM-5O993
60-69 years, male
8.2
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
7.2
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
6.8
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
6.7
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
6.5
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
6.3
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
6.3
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
6.2
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
5.5
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
5.2
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
4.5
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
4.1
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
4.0
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
2.5
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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