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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 130.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 3.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1287.6
Min RPKM: 1.0
Std RPKM: 278.9
Median RPKM: 135.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
1287.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
1185.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
1060.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
1060.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
1049.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
1022.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
981.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
909.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
901.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
895.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
874.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
844.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
792.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
733.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
719.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
710.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
681.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
651.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
651.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
650.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
626.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
607.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
605.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
601.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
587.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
585.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
581.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
580.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
577.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
569.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
568.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
560.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
559.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
548.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
546.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
531.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
519.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
515.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
505.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
498.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
498.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
496.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
492.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
487.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
481.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
478.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
478.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
477.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
475.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
466.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
465.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
455.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
445.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
443.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
442.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
441.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
415.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
412.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
410.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
389.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
388.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
387.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
381.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
379.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
350.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
347.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
342.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
335.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
328.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
323.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
317.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
312.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
305.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
298.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
294.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
290.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
286.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
274.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
272.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
267.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
265.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
265.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
265.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
261.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
253.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
251.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
250.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
245.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
239.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
232.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
227.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
205.0
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
198.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
196.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
195.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
184.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
182.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
181.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
158.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
157.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
156.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
149.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
148.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
148.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
147.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
144.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
139.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
131.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
125.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
122.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
120.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
120.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
118.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
113.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
112.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
107.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
104.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
101.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
99.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
95.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
94.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
92.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
88.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
88.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
84.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
82.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
82.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
80.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
79.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
79.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
77.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
75.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
71.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
71.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
66.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
64.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
62.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
60.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
59.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
59.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
59.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
57.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
56.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
55.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
54.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
52.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
51.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
49.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
47.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
46.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
43.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
43.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
40.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
39.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
36.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
30.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
29.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
29.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
28.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
25.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
24.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
21.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
19.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
19.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
18.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
18.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
18.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
16.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
16.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
16.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
16.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
15.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
15.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
15.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
13.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
12.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
12.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
12.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
11.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
11.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
10.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
10.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
9.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
9.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
9.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
8.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
7.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
6.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
6.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
6.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
5.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
5.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
5.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
5.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
5.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
5.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
5.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
4.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
4.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
4.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
4.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
3.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
3.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
3.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
3.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
3.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
2.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
2.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
2.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
2.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
1.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.