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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 674.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 840.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 943.2
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 705.5
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 887.1
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 650.4
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 320.4
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 301.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 328.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 531.1
Min RPKM: 242.1
Std RPKM: 46.9
Median RPKM: 353.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
531.1
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
482.9
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
441.9
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
439.7
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
439.7
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
438.6
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
437.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
435.3
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
435.1
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
434.7
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
433.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
432.2
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
431.0
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
430.5
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
428.7
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
427.8
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
424.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
422.6
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
420.3
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
419.5
GTEX-13112-0226-SM-5P9IV
50-59 years, male
417.4
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
414.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
414.5
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
410.4
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
403.5
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
402.1
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
401.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
401.1
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
399.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
398.4
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
396.5
GTEX-11DXZ-2126-SM-59881
50-59 years, male
396.0
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
394.7
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
393.6
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
393.6
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
393.4
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
389.2
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
388.9
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
388.0
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
387.5
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
386.5
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
385.9
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
385.8
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
383.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
383.5
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
383.5
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
381.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
381.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
380.9
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
379.2
GTEX-117XS-2026-SM-5GID1
60-69 years, male
378.0
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
377.9
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
376.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
375.0
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
373.7
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
372.1
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
372.1
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
372.0
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
370.8
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
370.3
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
369.9
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
369.9
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
369.3
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
369.3
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
368.4
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
368.3
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
367.8
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
366.0
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
364.6
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
363.4
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
362.9
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
362.8
GTEX-QLQW-1026-SM-447A9
30-39 years, male
362.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
362.0
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
360.5
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
359.6
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
359.2
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
358.8
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
358.5
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
358.4
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
357.7
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
357.7
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
357.1
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
355.6
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
354.8
GTEX-12696-0226-SM-5EGL3
60-69 years, male
354.1
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
353.2
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
353.1
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
353.1
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
353.1
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
352.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
351.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
350.9
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
350.3
GTEX-Y111-2426-SM-4TT23
50-59 years, male
350.1
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
349.9
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
347.2
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
347.0
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
346.8
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
346.1
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
345.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
345.6
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
345.0
GTEX-11OF3-1826-SM-5987N
60-69 years, male
344.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
343.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
342.7
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
340.7
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
340.5
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
340.3
GTEX-R55C-1426-SM-48FED
40-49 years, male
339.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
338.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
337.4
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
336.5
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
336.1
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
335.6
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
335.3
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
334.5
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
334.4
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
334.2
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
333.9
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
332.9
GTEX-X261-2326-SM-4PQYU
50-59 years, male
332.5
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
332.2
GTEX-R55D-0126-SM-48FEL
50-59 years, male
331.4
GTEX-S33H-0126-SM-4AD62
30-39 years, male
330.6
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
329.6
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
328.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
327.4
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
327.3
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
327.2
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
324.5
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
324.3
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
323.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
323.5
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
323.1
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
322.8
GTEX-S95S-1126-SM-4B64E
60-69 years, male
319.4
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
318.5
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
318.3
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
318.1
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
317.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
315.4
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
315.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
312.7
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
312.2
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
308.8
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
308.6
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
306.3
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
304.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
304.0
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
301.5
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
297.4
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
297.2
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
296.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
295.0
GTEX-13111-1526-SM-5EGJX
50-59 years, male
293.7
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
293.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
292.2
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
290.1
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
288.4
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
286.5
GTEX-XPT6-1626-SM-4B655
20-29 years, male
285.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
281.8
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
280.5
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
277.0
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
272.4
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
271.2
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
263.9
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
260.6
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
255.0
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
250.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
242.1
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.