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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 612.3
Min RPKM: 298.5
Std RPKM: 60.8
Median RPKM: 431.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
612.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
540.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
535.4
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
522.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
519.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
516.2
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
512.9
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
507.5
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
507.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
504.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
503.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
500.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
494.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
493.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
489.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
485.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
482.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
481.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
481.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
481.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
478.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
478.6
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
478.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
474.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
474.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
472.0
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
471.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
467.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
467.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
464.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
463.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
463.2
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
461.0
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
458.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
454.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
452.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
449.2
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
449.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
445.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
443.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
443.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
443.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
442.5
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
441.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
441.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
440.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
439.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
437.7
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
437.3
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
434.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
433.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
431.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
431.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
428.6
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
425.8
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
423.1
GTEX-PX3G-0926-SM-48U12
20-29 years, female
420.6
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
414.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
413.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
413.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
411.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
409.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
408.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
406.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
401.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
398.7
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
394.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
390.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
389.4
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
389.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
388.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
383.1
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
382.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
382.2
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
378.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
378.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
377.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
376.4
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
374.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
373.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
372.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
367.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
365.4
GTEX-13111-0126-SM-5EGHO
50-59 years, male
365.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
362.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
362.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
358.5
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
358.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
357.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
348.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
347.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
345.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
345.2
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
344.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
343.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
342.2
GTEX-Q734-0226-SM-48U1A
40-49 years, female
338.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
336.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
336.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
330.2
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
325.9
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
304.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
304.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
298.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.