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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1743.3
Min RPKM: 637.4
Std RPKM: 234.0
Median RPKM: 1082.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1743.3
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1710.4
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1655.8
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1528.2
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1493.3
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1491.6
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1461.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1453.3
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1437.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1416.9
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1410.2
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1396.3
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1391.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1323.7
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1295.6
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1249.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1248.1
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1238.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1235.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1234.4
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1218.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1209.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1194.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1182.0
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1177.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1171.3
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1170.7
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1170.3
GTEX-11I78-1926-SM-59878
50-59 years, female
1164.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1162.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1157.1
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1151.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1143.5
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1141.0
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1139.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1135.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1123.2
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1110.4
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1108.4
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1108.2
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1105.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1103.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1098.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1097.9
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1096.8
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1086.4
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1085.6
GTEX-P78B-1926-SM-3P616
40-49 years, female
1084.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1082.9
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
1079.4
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1070.8
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1069.0
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1039.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1030.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1030.3
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1024.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1015.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1002.5
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
994.2
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
985.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
980.8
GTEX-S32W-1226-SM-4AD67
50-59 years, female
980.5
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
977.8
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
977.2
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
974.0
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
965.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
964.3
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
955.6
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
951.9
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
940.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
938.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
915.9
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
914.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
907.3
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
897.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
895.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
884.5
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
863.0
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
854.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
851.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
849.3
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
848.5
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
829.1
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
804.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
804.6
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
795.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
793.0
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
758.0
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
741.7
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
741.4
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
739.6
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
713.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
709.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
697.5
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
694.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
659.3
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
637.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.