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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 371.1
Min RPKM: 73.1
Std RPKM: 64.5
Median RPKM: 231.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
371.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
369.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
361.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
341.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
335.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
328.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
327.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
321.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
320.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
319.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
319.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
317.3
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
313.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
312.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
310.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
299.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
294.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
291.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
291.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
289.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
287.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
287.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
285.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
282.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
282.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
280.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
279.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
278.0
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
272.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
269.8
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
269.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
265.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
264.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
264.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
264.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
264.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
257.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
253.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
252.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
252.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
251.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
251.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
251.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
250.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
248.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
247.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
246.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
245.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
244.3
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
244.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
242.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
238.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
237.9
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
237.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
237.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
236.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
233.3
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
232.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
231.6
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
231.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
230.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
228.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
226.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
225.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
225.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
223.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
222.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
221.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
220.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
220.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
220.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
219.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
219.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
212.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
211.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
210.8
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
210.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
209.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
208.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
205.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
203.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
202.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
200.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
198.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
197.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
191.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
191.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
189.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
189.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
188.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
175.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
174.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
172.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
170.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
168.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
165.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
161.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
156.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
154.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
153.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
150.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
141.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
140.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
139.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
135.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
131.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
130.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
130.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
124.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
122.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
119.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
115.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
108.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
107.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
103.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
82.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
73.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.