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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 278.5
Min RPKM: 92.3
Std RPKM: 31.4
Median RPKM: 165.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
278.5
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
278.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
235.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
231.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
224.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
223.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
215.6
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
215.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
209.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
208.2
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
204.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
204.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
201.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
200.5
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
198.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
194.6
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
193.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
192.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
191.9
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
191.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
189.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
187.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
187.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
186.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
184.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
183.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
181.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
180.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
180.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
179.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
178.2
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
178.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
178.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
177.3
GTEX-R55G-0226-SM-48FEI
40-49 years, female
177.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
177.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
176.1
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
175.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
175.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
174.6
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
174.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
174.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
174.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
173.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
172.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
171.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
171.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
170.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
170.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
170.3
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
166.4
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
166.3
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
165.3
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
164.0
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
163.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
162.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
162.8
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
161.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
160.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
155.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
155.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
154.8
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
154.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
153.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
151.1
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
149.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
149.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
149.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
149.6
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
149.4
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
149.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
148.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
148.7
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
147.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
147.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
146.9
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
145.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
145.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
145.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
145.0
GTEX-QCQG-0226-SM-48U28
50-59 years, female
144.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
143.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
143.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
140.8
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
140.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
139.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
138.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
137.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
136.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
135.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
133.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
132.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
132.1
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
129.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
126.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
126.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
125.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
125.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
124.9
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
124.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
122.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
122.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
122.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
92.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.