Fields »
ABOUTMENU
HELP
NEWS
RAB4B
COLON - Expression summary
RNA expressioni
HPA:16.8TPM
GTEx:14.9RPKM
FANTOM5:13.0Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 16.8
overview Male, age 54 Sample 1
TPM: 28.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 36.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 14.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 21.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 14.9
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 11.5
Samples: 149

Max RPKM: 17.9
Min RPKM: 5.0
Std RPKM: 2.5
Median RPKM: 11.2
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 17.9
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 17.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 16.6
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 16.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 16.4
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 16.0
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 15.9
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 15.7
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 15.6
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 15.6
Show all
Colon - Transverse
RPKM: 17.6
Samples: 196

Max RPKM: 38.8
Min RPKM: 6.5
Std RPKM: 5.4
Median RPKM: 17.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 38.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 32.2
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 31.1
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 30.0
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 29.0
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 28.5
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 28.4
GTEX-QLQW-0426-SM-447A7 30-39 years, male 28.1
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 27.1
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 27.0
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 13.0
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 13.3
FF:10014-101C5 62,83,84 years, mixed 13.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.