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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 354.2
Min RPKM: 33.7
Std RPKM: 63.2
Median RPKM: 176.0
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
354.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
306.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
305.5
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
301.6
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
279.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
277.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
272.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
271.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
262.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
256.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
253.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
252.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
250.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
250.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
248.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
243.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
241.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
230.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
229.6
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
229.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
228.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
225.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
225.2
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
224.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
223.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
222.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
222.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
221.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
220.1
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
220.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
217.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
216.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
213.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
212.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
210.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
206.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
203.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
202.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
199.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
199.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
199.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
198.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
198.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
194.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
194.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
191.1
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
190.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
190.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
189.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
189.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
188.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
186.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
182.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
181.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
179.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
179.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
178.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
176.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
176.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
175.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
173.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
172.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
170.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
163.3
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
162.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
160.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
159.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
159.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
158.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
155.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
155.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
150.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
149.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
148.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
147.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
147.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
145.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
145.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
140.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
139.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
138.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
136.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
132.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
131.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
130.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
126.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
125.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
118.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
118.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
117.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
117.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
114.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
111.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
111.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
109.9
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
109.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
105.4
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
105.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
102.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
102.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
99.7
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
97.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
95.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
95.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
94.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
91.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
89.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
89.0
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
88.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
85.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
79.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
65.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
62.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
55.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
51.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
38.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
33.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.