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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 910.6
Min RPKM: 357.6
Std RPKM: 138.5
Median RPKM: 602.0
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
910.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
903.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
898.2
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
860.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
846.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
838.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
817.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
815.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
815.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
813.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
805.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
796.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
793.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
788.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
788.3
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
787.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
785.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
765.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
761.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
752.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
747.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
745.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
743.0
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
728.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
724.4
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
718.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
708.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
708.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
703.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
698.6
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
694.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
694.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
681.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
677.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
672.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
671.8
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
667.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
655.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
653.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
647.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
642.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
640.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
640.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
632.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
631.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
629.4
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
625.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
618.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
618.2
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
618.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
612.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
602.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
602.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
597.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
595.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
592.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
589.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
582.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
573.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
568.4
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
567.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
561.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
549.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
548.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
547.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
546.5
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
546.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
534.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
529.5
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
527.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
520.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
517.6
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
516.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
503.5
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
503.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
499.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
494.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
493.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
491.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
488.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
485.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
481.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
477.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
476.6
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
472.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
469.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
466.9
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
466.5
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
454.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
453.7
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
452.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
452.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
450.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
446.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
439.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
439.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
424.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
414.8
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
397.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
393.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
372.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
369.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
365.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
357.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.