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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2118.5
Min RPKM: 649.8
Std RPKM: 298.8
Median RPKM: 1177.5
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
2118.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
2076.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1978.2
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1978.2
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1974.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1756.2
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1719.6
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1691.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1686.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1630.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1628.3
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1576.0
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1562.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1560.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1551.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1546.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1507.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1507.2
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1480.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1411.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
1410.2
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1404.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1402.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1399.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1390.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1377.6
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1362.1
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1335.9
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1308.1
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1303.1
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1291.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1289.9
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1283.4
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1275.6
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1275.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1265.6
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1264.9
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1256.5
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1250.2
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1249.0
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1240.8
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1219.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1196.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
1196.2
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1188.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1187.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1186.7
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1185.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1177.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1177.4
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1176.2
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1171.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
1170.9
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1167.2
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1144.0
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1136.4
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1125.1
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1109.8
GTEX-11I78-1926-SM-59878
50-59 years, female
1105.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
1105.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1104.8
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1100.6
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1079.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
1075.8
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1067.2
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1059.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1057.3
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1054.6
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1045.9
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
1044.7
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1031.0
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
1030.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1016.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1013.3
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1007.5
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
1004.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
1002.3
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
989.1
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
981.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
981.7
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
977.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
977.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
959.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
955.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
924.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
924.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
913.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
886.1
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
872.8
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
870.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
855.2
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
836.1
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
835.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
807.7
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
804.3
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
729.3
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
649.8
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.