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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 445.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 258.7
Min RPKM: 68.9
Std RPKM: 37.2
Median RPKM: 139.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
258.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
246.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
244.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
239.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
232.5
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
231.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
230.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
212.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
212.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
210.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
207.0
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
203.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
201.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
193.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
189.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
186.9
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
183.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
178.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
178.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
174.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
173.6
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
173.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
172.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
172.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
169.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
169.3
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
167.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
163.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
163.4
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
162.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
161.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
158.5
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
157.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
156.7
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
155.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
154.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
153.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
153.4
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
153.4
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
152.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
150.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
150.2
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
149.3
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
148.8
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
148.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
147.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
147.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
147.2
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
147.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
146.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
144.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
143.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
143.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
142.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
141.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
140.3
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
139.9
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
139.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
138.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
136.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
136.6
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
135.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
135.2
GTEX-1128S-2726-SM-5H12C
60-69 years, female
134.8
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
134.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
134.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
134.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
132.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
132.1
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
132.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
131.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
131.4
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
130.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
129.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
129.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
128.5
GTEX-11PRG-2926-SM-5987A
50-59 years, male
128.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
128.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
127.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
127.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
126.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
126.6
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
126.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
125.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
125.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
125.1
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
122.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
122.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
121.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
120.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
120.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
119.9
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
119.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
118.0
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
117.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
117.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
116.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
116.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
114.8
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
112.5
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
109.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
109.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
108.3
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
105.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
100.9
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
100.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
98.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
97.6
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
95.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
94.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
88.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
86.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
74.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
68.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 146.3
Samples: 108
Max RPKM: 319.1
Min RPKM: 69.3
Std RPKM: 40.6
Median RPKM: 140.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
319.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
258.8
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
251.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
248.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
247.6
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
220.9
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
212.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
211.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
208.9
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
194.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
192.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
189.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
186.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
182.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
181.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
180.3
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
179.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
177.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
175.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
174.7
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
173.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
173.0
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
172.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
171.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
170.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
168.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
165.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
162.5
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
162.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
161.9
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
160.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
160.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
157.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
157.1
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
156.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
156.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
155.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
155.3
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
154.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
152.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
151.6
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
151.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
151.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
151.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
151.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
150.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
149.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
145.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
145.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
144.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
143.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
142.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
141.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
140.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
139.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
139.7
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
139.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
139.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
139.6
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
138.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
137.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
137.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
136.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
135.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
133.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
132.7
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
132.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
131.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
129.8
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
129.5
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
128.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
127.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
125.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
125.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
125.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
124.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
123.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
123.2
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
121.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
121.0
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
119.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
119.3
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
117.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
116.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
116.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
115.2
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
115.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
113.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
112.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
111.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
111.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
110.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
109.6
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
108.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
108.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
104.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
103.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
101.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
99.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
97.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
96.7
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
92.3
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
86.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
84.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
82.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
80.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
78.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
69.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.