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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 350.7
Min RPKM: 69.8
Std RPKM: 44.4
Median RPKM: 145.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
350.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
300.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
283.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
239.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
235.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
232.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
227.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
223.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
220.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
218.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
218.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
214.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
214.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
211.7
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
209.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
195.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
192.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
191.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
187.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
185.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
185.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
183.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
182.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
180.6
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
170.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
169.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
168.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
167.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
165.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
165.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
164.7
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
164.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
163.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
161.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
161.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
159.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
158.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
158.4
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
157.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
156.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
156.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
156.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
156.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
155.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
155.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
155.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
154.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
154.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
154.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
154.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
153.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
151.6
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
151.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
151.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
150.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
148.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
147.7
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
146.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
145.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
145.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
145.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
145.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
143.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
142.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
142.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
141.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
141.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
141.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
140.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
138.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
138.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
138.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
138.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
136.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
135.5
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
135.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
134.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
133.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
132.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
131.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
131.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
131.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
130.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
129.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
128.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
126.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
124.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
124.7
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
124.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
122.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
122.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
119.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
119.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
119.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
118.2
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
117.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
116.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
115.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
115.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
115.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
114.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
114.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
114.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
113.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
108.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
104.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
102.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
98.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
97.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
94.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
88.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
87.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
84.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
79.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
78.9
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
76.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
69.8
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.