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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1920
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1599.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2177.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1682.1
Min RPKM: 221.8
Std RPKM: 225.6
Median RPKM: 548.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1682.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1354.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1293.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1262.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1227.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1125.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1118.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1089.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1081.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1075.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1071.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1066.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1052.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1047.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1028.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1022.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1007.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
994.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
987.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
948.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
943.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
916.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
915.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
875.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
808.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
795.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
788.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
775.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
773.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
770.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
765.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
755.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
753.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
752.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
748.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
747.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
741.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
740.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
735.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
734.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
730.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
725.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
723.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
723.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
722.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
720.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
719.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
719.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
713.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
705.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
698.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
695.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
694.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
691.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
689.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
684.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
684.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
676.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
675.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
670.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
666.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
663.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
661.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
661.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
657.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
654.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
653.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
644.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
641.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
639.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
637.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
633.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
625.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
622.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
621.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
617.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
616.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
615.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
615.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
613.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
613.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
607.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
605.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
601.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
601.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
599.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
597.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
589.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
588.2
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
584.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
578.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
577.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
576.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
575.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
574.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
573.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
569.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
567.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
567.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
566.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
565.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
564.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
562.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
556.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
554.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
554.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
549.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
548.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
548.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
547.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
544.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
539.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
538.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
536.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
532.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
531.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
531.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
531.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
530.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
525.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
525.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
524.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
523.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
520.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
516.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
513.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
503.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
502.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
501.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
499.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
497.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
496.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
496.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
493.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
493.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
493.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
493.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
491.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
491.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
491.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
490.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
489.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
486.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
486.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
485.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
483.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
482.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
477.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
477.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
471.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
469.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
466.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
466.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
464.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
461.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
461.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
458.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
457.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
456.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
447.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
440.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
436.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
435.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
434.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
432.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
432.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
430.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
427.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
424.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
422.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
421.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
416.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
414.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
412.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
409.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
409.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
408.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
407.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
405.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
404.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
404.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
395.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
394.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
384.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
382.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
382.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
381.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
378.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
372.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
368.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
364.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
364.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
360.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
356.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
349.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
349.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
342.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
341.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
340.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
340.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
335.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
331.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
329.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
324.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
306.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
301.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
296.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
287.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
256.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
248.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
247.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
245.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
244.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
221.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.