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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 1230
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 1180.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 648.1
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 1627.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 1711.8
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 1154.9
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 576.6
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 1252.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1221.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1098.7
Min RPKM: 252.8
Std RPKM: 187.0
Median RPKM: 692.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
1098.7
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
1043.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
1033.2
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
1028.1
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
1005.2
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
997.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
995.1
GTEX-13112-0226-SM-5P9IV
50-59 years, male
994.3
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
993.2
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
989.1
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
974.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
969.3
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
965.2
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
950.7
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
942.9
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
936.8
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
935.5
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
926.4
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
924.7
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
920.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
914.8
GTEX-S95S-1126-SM-4B64E
60-69 years, male
912.0
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
902.8
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
902.7
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
872.6
GTEX-REY6-0126-SM-48FDT
60-69 years, male
868.5
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
866.1
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
864.8
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
862.9
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
862.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
858.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
856.8
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
856.4
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
854.0
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
849.9
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
844.0
GTEX-Y111-2426-SM-4TT23
50-59 years, male
843.9
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
829.0
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
825.8
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
822.0
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
817.5
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
806.5
GTEX-11OF3-1826-SM-5987N
60-69 years, male
804.8
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
803.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
802.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
798.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
796.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
796.6
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
796.2
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
793.6
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
793.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
792.9
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
791.9
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
791.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
790.0
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
787.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
777.7
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
769.5
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
769.5
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
764.9
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
758.9
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
755.4
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
755.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
754.9
GTEX-V955-1926-SM-4KL1L
60-69 years, male
751.1
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
741.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
740.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
734.7
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
734.3
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
725.9
GTEX-117XS-2026-SM-5GID1
60-69 years, male
725.2
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
723.1
GTEX-13111-1526-SM-5EGJX
50-59 years, male
722.2
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
721.9
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
720.7
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
719.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
716.1
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
715.2
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
711.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
710.7
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
707.9
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
707.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
705.7
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
699.0
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
696.7
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
694.3
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
691.0
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
689.5
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
685.3
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
681.2
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
670.2
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
668.3
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
667.7
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
667.0
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
666.4
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
665.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
659.4
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
659.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
659.3
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
652.8
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
648.6
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
647.6
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
646.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
642.2
GTEX-R55D-0126-SM-48FEL
50-59 years, male
641.3
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
640.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
633.8
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
632.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
631.7
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
631.2
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
630.0
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
623.1
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
619.4
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
618.2
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
618.0
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
616.5
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
610.3
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
607.5
GTEX-X261-2326-SM-4PQYU
50-59 years, male
605.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
600.0
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
596.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
587.9
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
586.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
581.0
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
580.0
GTEX-XPT6-1626-SM-4B655
20-29 years, male
576.4
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
575.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
571.8
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
571.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
567.9
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
565.2
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
564.1
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
557.1
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
552.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
540.6
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
529.8
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
525.4
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
524.7
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
505.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
487.1
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
477.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
471.7
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
469.9
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
469.2
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
462.8
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
461.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
456.6
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
454.9
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
448.2
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
432.9
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
425.8
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
422.8
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
409.8
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
404.2
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
403.7
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
403.1
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
389.9
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
389.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
387.0
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
375.5
GTEX-S33H-0126-SM-4AD62
30-39 years, male
375.4
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
365.9
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
354.6
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
352.4
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
332.5
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
325.6
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
321.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
318.9
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
314.9
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
309.4
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
294.7
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
252.8
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.