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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 532.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 446.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 163.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 659.7
Min RPKM: 70.2
Std RPKM: 116.6
Median RPKM: 190.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
659.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
635.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
587.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
492.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
491.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
479.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
469.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
449.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
445.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
437.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
433.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
433.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
432.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
432.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
430.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
427.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
426.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
426.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
424.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
409.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
401.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
398.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
397.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
396.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
392.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
388.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
388.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
387.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
387.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
383.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
381.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
379.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
376.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
372.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
366.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
362.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
358.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
356.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
356.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
343.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
336.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
335.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
334.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
333.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
328.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
327.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
326.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
321.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
319.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
319.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
311.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
308.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
305.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
303.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
301.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
300.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
296.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
296.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
295.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
295.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
292.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
290.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
285.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
284.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
283.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
282.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
280.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
278.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
273.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
273.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
270.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
263.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
262.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
261.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
259.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
258.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
257.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
256.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
249.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
247.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
247.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
245.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
245.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
245.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
243.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
243.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
236.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
236.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
234.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
228.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
225.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
224.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
224.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
223.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
217.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
216.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
216.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
213.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
213.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
212.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
207.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
206.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
205.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
203.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
197.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
192.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
190.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
190.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
189.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
187.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
184.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
184.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
183.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
180.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
179.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
177.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
177.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
175.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
175.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
174.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
173.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
173.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
172.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
171.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
171.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
170.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
170.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
170.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
169.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
169.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
167.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
166.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
163.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
162.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
161.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
161.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
160.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
160.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
159.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
159.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
158.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
156.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
154.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
153.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
151.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
151.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
150.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
150.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
149.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
149.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
148.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
147.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
146.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
146.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
146.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
146.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
142.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
140.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
138.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
138.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
136.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
136.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
132.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
132.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
131.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
131.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
131.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
130.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
130.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
129.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
128.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
127.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
126.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
126.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
126.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
126.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
125.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
125.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
124.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
124.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
124.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
124.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
122.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
122.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
121.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
121.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
120.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
119.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
117.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
113.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
112.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
112.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
109.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
108.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
108.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
106.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
105.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
104.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
102.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
101.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
101.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
99.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
97.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
94.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
92.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
90.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
88.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
88.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
86.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
82.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
81.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
72.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
70.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
70.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.