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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 215.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 166.1
Min RPKM: 32.5
Std RPKM: 29.9
Median RPKM: 101.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
166.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
160.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
152.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
146.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
142.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
140.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
140.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
139.9
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
139.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
139.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
138.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
138.4
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
138.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
137.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
137.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
134.4
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
133.3
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
133.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
133.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
131.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
130.5
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
130.5
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
128.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
127.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
126.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
125.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
125.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
124.4
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
123.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
123.3
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
122.0
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
121.8
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
121.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
121.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
121.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
120.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
120.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
118.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
118.1
GTEX-X585-3026-SM-46MWF
50-59 years, male
117.3
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
117.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
116.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
116.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
116.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
116.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
115.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
115.7
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
110.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
109.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
108.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
108.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
107.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
105.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
104.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
103.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
101.4
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
101.3
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
100.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
100.1
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
99.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
99.6
GTEX-1128S-2726-SM-5H12C
60-69 years, female
99.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
98.6
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
98.4
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
97.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
96.9
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
96.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
94.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
94.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
94.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
93.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
92.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
91.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
91.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
90.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
90.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
90.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
89.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
89.6
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
86.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
86.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
84.0
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
82.7
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
82.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
82.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
79.9
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
79.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
78.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
77.8
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
72.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
71.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
71.5
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
70.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
69.7
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
69.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
67.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
65.9
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
65.7
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
65.3
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
65.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
62.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
59.2
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
59.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
58.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
55.3
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
50.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
48.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
47.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
45.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
43.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
40.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
39.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
39.2
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
32.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 96.5
Samples: 108
Max RPKM: 205.9
Min RPKM: 24.5
Std RPKM: 36.5
Median RPKM: 101.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
205.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
187.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
166.5
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
161.5
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
159.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
155.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
153.8
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
152.9
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
142.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
138.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
136.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
136.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
134.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
130.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
129.3
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
128.7
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
128.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
128.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
127.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
127.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
125.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
125.1
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
124.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
123.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
123.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
122.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
122.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
122.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
121.6
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
120.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
117.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
117.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
117.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
117.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
116.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
116.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
115.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
110.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
109.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
107.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
107.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
107.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
107.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
107.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
106.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
105.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
105.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
105.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
105.3
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
104.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
103.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
103.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
103.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
101.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
101.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
100.9
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
100.3
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
100.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
99.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
99.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
98.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
98.0
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
96.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
94.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
94.3
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
94.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
91.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
83.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
82.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
81.8
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
81.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
80.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
80.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
79.4
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
77.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
77.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
73.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
72.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
72.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
72.4
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
71.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
68.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
67.6
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
65.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
64.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
60.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
55.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
55.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
55.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
55.0
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
54.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
54.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
48.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
44.7
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
44.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
43.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
42.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
42.0
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
41.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
41.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
41.1
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
39.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
39.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
38.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
35.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
31.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
27.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
24.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.