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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 292.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 14.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 15
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1486.7
Min RPKM: 1.0
Std RPKM: 290.4
Median RPKM: 156.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
1486.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
1409.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
1068.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
985.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
955.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
879.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
872.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
871.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
838.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
834.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
801.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
792.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
767.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
764.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
758.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
750.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
747.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
746.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
726.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
722.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
720.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
698.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
680.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
680.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
655.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
647.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
643.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
636.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
627.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
623.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
613.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
611.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
610.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
608.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
601.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
596.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
594.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
577.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
574.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
564.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
557.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
557.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
550.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
545.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
533.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
527.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
500.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
498.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
490.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
480.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
471.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
469.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
460.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
450.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
441.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
431.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
427.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
420.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
419.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
414.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
401.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
397.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
396.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
382.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
381.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
380.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
377.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
375.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
372.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
366.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
348.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
338.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
336.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
320.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
317.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
316.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
315.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
314.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
312.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
285.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
280.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
273.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
264.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
259.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
259.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
258.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
256.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
254.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
252.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
244.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
242.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
240.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
232.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
232.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
231.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
231.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
219.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
219.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
198.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
192.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
192.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
185.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
184.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
175.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
165.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
164.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
158.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
154.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
145.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
135.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
134.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
133.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
132.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
131.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
128.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
124.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
124.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
122.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
116.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
115.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
107.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
105.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
92.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
90.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
89.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
89.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
88.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
86.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
86.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
82.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
77.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
74.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
73.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
73.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
70.4
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
68.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
57.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
56.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
52.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
49.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
49.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
47.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
47.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
47.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
46.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
45.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
44.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
43.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
41.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
41.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
40.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
40.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
40.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
35.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
34.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
32.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
31.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
26.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
26.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
26.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
25.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
24.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
23.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
21.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
19.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
19.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
18.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
17.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
15.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
15.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
15.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
14.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
13.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
12.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
12.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
12.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
12.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
11.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
10.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
9.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
8.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
8.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
8.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
8.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
7.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
7.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
6.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
6.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
6.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
6.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
6.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
6.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
5.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
5.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
5.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
5.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
5.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
5.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
4.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
4.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
4.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
3.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
3.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
3.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
3.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
3.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
1.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
1.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.