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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 401.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 347.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 324.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 414.8
Min RPKM: 91.8
Std RPKM: 52.0
Median RPKM: 165.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
414.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
413.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
377.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
334.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
321.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
299.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
298.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
298.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
290.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
279.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
275.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
273.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
270.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
266.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
266.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
259.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
246.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
246.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
246.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
244.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
242.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
239.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
236.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
236.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
235.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
233.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
232.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
230.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
229.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
228.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
228.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
227.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
226.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
225.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
223.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
222.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
219.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
218.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
218.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
216.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
215.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
213.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
212.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
211.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
210.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
208.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
208.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
208.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
208.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
207.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
206.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
205.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
204.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
204.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
202.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
201.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
201.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
200.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
200.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
199.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
196.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
195.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
195.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
195.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
192.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
192.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
191.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
191.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
190.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
188.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
187.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
187.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
187.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
184.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
183.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
182.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
182.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
180.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
180.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
179.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
179.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
178.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
177.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
177.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
176.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
175.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
174.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
173.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
172.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
171.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
170.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
170.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
170.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
170.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
169.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
169.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
169.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
169.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
168.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
167.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
167.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
166.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
166.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
166.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
166.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
166.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
165.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
165.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
165.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
163.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
163.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
162.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
161.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
161.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
161.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
161.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
160.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
160.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
160.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
160.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
160.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
159.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
159.5
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
159.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
159.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
159.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
158.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
157.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
156.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
156.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
156.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
156.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
155.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
155.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
154.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
154.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
154.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
154.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
152.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
152.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
152.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
151.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
151.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
150.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
150.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
150.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
150.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
149.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
149.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
149.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
149.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
148.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
148.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
148.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
147.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
147.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
147.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
146.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
145.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
145.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
144.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
144.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
143.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
143.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
142.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
140.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
140.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
140.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
140.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
139.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
139.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
139.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
139.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
138.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
138.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
137.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
136.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
136.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
136.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
135.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
135.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
135.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
134.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
133.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
131.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
131.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
128.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
127.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
126.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
126.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
126.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
125.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
125.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
122.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
122.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
121.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
120.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
120.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
119.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
119.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
118.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
117.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
117.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
117.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
117.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
114.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
113.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
110.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
110.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
107.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
105.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
103.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
103.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
91.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.