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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 95.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 45.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 25.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 389.6
Min RPKM: 11.7
Std RPKM: 76.5
Median RPKM: 107.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
389.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
386.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
372.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
366.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
320.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
309.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
307.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
302.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
289.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
284.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
282.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
271.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
264.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
256.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
254.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
252.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
248.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
243.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
242.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
235.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
225.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
224.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
221.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
221.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
213.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
201.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
200.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
198.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
198.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
197.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
197.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
195.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
194.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
192.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
189.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
187.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
184.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
183.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
180.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
179.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
177.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
176.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
172.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
172.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
172.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
171.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
170.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
167.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
166.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
165.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
164.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
163.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
160.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
160.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
159.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
157.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
156.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
156.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
154.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
152.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
151.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
149.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
149.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
147.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
147.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
147.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
145.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
143.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
141.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
141.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
139.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
138.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
138.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
136.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
135.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
133.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
133.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
130.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
130.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
130.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
129.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
126.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
126.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
124.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
124.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
123.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
123.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
123.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
122.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
120.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
120.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
119.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
119.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
118.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
117.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
117.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
116.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
116.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
115.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
114.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
112.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
111.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
110.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
109.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
109.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
109.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
107.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
106.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
106.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
106.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
105.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
104.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
102.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
101.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
100.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
99.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
99.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
97.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
97.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
96.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
93.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
93.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
93.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
92.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
92.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
91.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
89.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
89.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
89.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
89.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
87.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
86.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
86.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
85.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
85.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
83.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
82.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
81.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
81.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
81.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
80.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
79.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
79.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
77.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
77.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
76.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
76.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
72.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
72.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
71.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
71.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
70.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
70.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
69.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
69.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
69.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
67.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
66.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
66.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
66.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
64.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
64.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
62.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
61.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
59.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
56.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
55.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
55.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
55.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
54.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
54.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
54.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
53.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
53.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
53.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
53.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
52.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
52.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
50.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
50.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
50.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
50.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
48.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
47.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
45.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
44.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
43.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
43.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
42.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
41.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
40.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
39.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
39.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
36.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
34.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
31.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
31.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
31.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
30.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
29.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
27.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
26.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
26.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
26.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
23.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
22.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
20.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
19.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
18.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
17.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
15.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
15.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
14.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
11.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.