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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 522.2
Min RPKM: 177.5
Std RPKM: 68.6
Median RPKM: 276.6
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
522.2
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
496.3
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
478.6
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
460.3
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
435.0
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
408.4
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
404.5
GTEX-11I78-1926-SM-59878
50-59 years, female
390.0
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
387.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
379.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
377.6
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
376.4
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
370.3
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
362.6
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
361.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
353.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
350.7
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
341.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
339.2
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
338.4
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
333.0
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
332.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
331.0
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
318.8
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
318.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
318.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
318.2
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
317.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
316.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
312.8
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
311.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
306.6
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
304.7
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
304.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
300.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
300.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
297.3
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
296.6
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
290.6
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
288.9
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
286.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
284.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
283.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
281.8
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
281.6
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
281.2
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
278.3
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
277.1
GTEX-S32W-1226-SM-4AD67
50-59 years, female
276.6
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
276.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
275.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
272.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
270.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
270.2
GTEX-P78B-1926-SM-3P616
40-49 years, female
269.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
268.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
266.6
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
265.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
264.7
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
264.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
259.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
257.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
255.9
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
251.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
249.2
GTEX-S341-0726-SM-4AD5R
40-49 years, female
249.2
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
248.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
248.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
247.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
246.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
242.5
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
239.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
239.0
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
237.0
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
236.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
233.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
233.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
232.6
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
230.9
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
230.1
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
229.9
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
226.8
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
226.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
225.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
224.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
222.8
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
222.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
221.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
220.4
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
217.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
208.5
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
207.0
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
206.3
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
191.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
179.9
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
179.5
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
177.5
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.