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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 383.2
Min RPKM: 59.1
Std RPKM: 54.8
Median RPKM: 117.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
383.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
341.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
283.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
274.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
255.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
249.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
223.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
221.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
217.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
211.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
200.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
199.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
199.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
194.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
190.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
186.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
185.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
175.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
165.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
164.6
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
163.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
158.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
157.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
157.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
157.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
155.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
154.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
154.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
145.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
144.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
144.5
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
143.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
143.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
142.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
140.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
139.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
139.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
139.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
135.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
132.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
130.2
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
129.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
129.3
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
127.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
127.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
127.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
126.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
125.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
125.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
123.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
121.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
120.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
120.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
119.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
119.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
119.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
118.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
118.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
117.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
117.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
116.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
116.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
115.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
114.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
114.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
113.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
113.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
113.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
113.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
110.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
110.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
110.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
109.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
109.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
108.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
104.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
102.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
101.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
100.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
100.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
96.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
96.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
95.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
95.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
94.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
94.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
93.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
92.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
92.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
92.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
90.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
90.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
90.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
89.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
89.6
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
88.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
88.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
85.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
84.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
84.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
84.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
81.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
81.3
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
80.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
77.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
76.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
75.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
75.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
74.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
72.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
70.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
69.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
67.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
66.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
64.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
63.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
59.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.