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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 397.0
Min RPKM: 32.5
Std RPKM: 77.6
Median RPKM: 148.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
397.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
329.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
323.5
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
301.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
283.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
280.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
270.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
261.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
254.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
254.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
239.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
239.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
236.9
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
236.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
234.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
232.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
229.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
226.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
214.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
213.0
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
211.5
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
207.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
207.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
204.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
204.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
201.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
199.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
197.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
195.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
191.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
189.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
186.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
185.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
184.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
183.3
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
183.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
176.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
176.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
172.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
171.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
170.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
163.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
162.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
161.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
152.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
148.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
148.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
148.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
144.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
133.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
129.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
127.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
125.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
124.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
124.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
123.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
120.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
115.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
110.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
104.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
101.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
100.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
97.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
95.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
90.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
90.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
88.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
87.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
86.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
82.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
82.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
82.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
79.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
79.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
78.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
77.2
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
76.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
76.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
70.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
69.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
66.3
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
64.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
63.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
58.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
58.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
58.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
57.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
54.3
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
52.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
48.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
43.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
34.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
34.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
32.5
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.