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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1001.7
Min RPKM: 97.6
Std RPKM: 133.7
Median RPKM: 223.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
1001.7
GTEX-Q734-0226-SM-48U1A
40-49 years, female
655.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
619.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
598.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
579.7
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
479.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
467.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
463.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
448.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
446.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
422.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
414.3
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
413.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
406.3
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
403.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
394.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
393.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
388.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
386.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
375.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
374.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
338.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
331.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
328.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
326.3
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
312.2
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
312.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
311.1
GTEX-X585-1826-SM-4QAS3
50-59 years, male
298.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
294.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
293.0
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
290.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
290.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
289.3
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
286.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
265.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
261.9
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
260.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
259.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
256.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
255.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
253.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
250.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
246.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
240.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
239.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
238.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
238.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
234.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
232.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
231.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
226.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
220.3
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
218.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
218.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
217.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
214.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
213.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
212.2
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
212.0
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
209.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
208.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
208.7
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
208.5
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
205.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
204.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
198.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
196.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
195.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
195.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
193.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
192.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
191.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
191.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
189.9
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
188.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
185.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
184.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
182.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
181.2
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
180.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
177.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
175.3
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
173.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
173.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
167.9
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
165.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
164.6
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
164.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
164.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
161.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
157.7
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
157.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
156.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
155.7
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
154.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
154.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
151.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
151.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
151.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
146.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
139.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
119.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
97.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.