We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 363.1
Min RPKM: 70.4
Std RPKM: 56.3
Median RPKM: 142.5
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
363.1
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
307.2
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
300.7
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
297.1
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
291.5
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
270.8
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
266.7
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
234.4
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
216.4
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
215.4
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
211.4
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
207.7
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
203.5
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
200.4
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
199.4
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
192.8
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
191.4
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
188.9
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
182.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
180.6
GTEX-1192X-2526-SM-59868
50-59 years, male
175.9
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
175.6
GTEX-13113-1226-SM-5EGHT
60-69 years, female
174.2
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
172.2
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
169.7
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
167.2
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
165.8
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
163.9
GTEX-13111-1426-SM-5DUW3
50-59 years, male
163.1
GTEX-117YX-0326-SM-5GICL
50-59 years, male
162.7
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
162.7
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
162.1
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
159.8
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
159.7
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
158.8
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
157.5
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
156.8
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
153.4
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
152.0
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
150.3
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
146.7
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
145.6
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
145.5
GTEX-13O61-1326-SM-5KM31
60-69 years, male
144.9
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
140.2
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
138.7
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
137.7
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
137.0
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
131.8
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
131.3
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
129.9
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
129.3
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
128.8
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
128.4
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
127.7
GTEX-111YS-1426-SM-5GID8
60-69 years, male
127.5
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
126.6
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
124.0
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
119.0
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
118.0
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
116.3
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
114.0
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
113.9
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
113.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
112.4
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
112.1
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
111.9
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
111.7
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
110.1
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
109.6
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
109.5
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
108.4
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
106.5
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
105.4
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
105.0
GTEX-1122O-1326-SM-5H11F
60-69 years, female
102.8
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
102.7
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
101.2
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
100.2
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
97.6
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
94.8
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
94.5
GTEX-ZTSS-0926-SM-59865
40-49 years, male
92.5
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
90.6
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
90.5
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
88.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
74.1
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
70.4
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.