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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 566.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 30.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 76.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 402.4
Min RPKM: 8.9
Std RPKM: 86.6
Median RPKM: 127.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
402.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
387.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
386.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
386.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
356.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
343.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
339.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
328.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
319.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
314.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
313.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
312.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
302.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
297.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
292.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
292.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
288.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
286.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
273.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
272.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
271.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
269.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
267.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
258.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
257.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
255.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
254.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
253.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
245.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
242.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
239.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
237.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
234.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
234.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
234.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
228.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
227.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
227.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
226.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
225.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
224.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
218.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
215.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
213.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
211.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
211.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
209.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
209.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
207.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
205.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
204.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
203.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
202.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
201.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
199.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
198.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
197.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
191.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
191.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
190.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
189.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
189.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
188.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
188.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
186.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
185.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
185.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
178.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
177.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
176.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
175.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
171.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
171.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
170.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
169.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
168.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
168.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
168.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
165.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
164.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
162.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
158.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
154.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
150.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
150.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
148.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
146.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
144.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
143.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
143.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
141.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
140.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
139.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
136.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
136.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
136.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
135.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
135.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
134.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
134.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
132.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
132.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
129.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
129.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
129.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
127.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
127.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
126.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
126.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
125.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
125.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
125.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
123.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
122.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
121.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
119.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
118.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
117.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
116.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
116.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
115.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
114.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
114.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
112.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
112.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
110.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
110.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
108.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
107.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
107.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
107.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
107.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
105.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
105.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
105.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
104.4
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
103.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
102.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
100.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
99.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
98.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
97.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
96.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
94.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
94.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
94.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
93.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
92.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
91.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
91.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
91.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
90.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
90.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
88.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
88.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
88.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
88.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
83.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
83.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
82.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
81.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
80.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
77.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
75.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
74.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
74.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
73.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
71.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
71.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
69.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
69.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
67.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
66.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
65.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
63.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
63.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
63.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
63.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
60.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
59.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
54.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
54.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
53.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
50.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
48.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
48.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
48.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
47.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
47.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
46.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
44.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
44.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
43.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
41.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
41.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
40.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
39.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
36.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
34.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
34.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
32.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
28.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
26.1
GTEX-144GM-0926-SM-5O994
20-29 years, male
23.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
23.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
22.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
21.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
20.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
19.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
19.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
16.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
16.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
13.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
8.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.