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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 232.2
Min RPKM: 33.3
Std RPKM: 45.6
Median RPKM: 102.7
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
232.2
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
225.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
216.0
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
213.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
209.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
195.8
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
184.6
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
182.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
178.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
170.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
163.9
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
153.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
151.6
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
150.4
GTEX-S341-0726-SM-4AD5R
40-49 years, female
150.1
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
148.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
146.3
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
142.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
141.7
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
138.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
135.2
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
133.6
GTEX-11I78-1926-SM-59878
50-59 years, female
132.0
GTEX-QCQG-1426-SM-48U22
50-59 years, female
130.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
129.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
128.7
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
128.4
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
127.8
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
125.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
123.9
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
122.9
GTEX-RU72-2226-SM-46MUE
50-59 years, female
122.8
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
122.3
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
120.7
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
120.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
118.6
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
118.4
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
113.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
112.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
112.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
110.2
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
110.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
110.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
107.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
106.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
105.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
104.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
102.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
102.7
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
101.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
101.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
97.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
97.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
95.3
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
93.7
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
93.2
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
92.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
91.8
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
89.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
89.3
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
88.6
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
88.3
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
85.9
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
84.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
83.9
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
82.5
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
77.5
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
76.9
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
76.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
76.2
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
71.8
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
69.0
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
66.2
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
65.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
64.5
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
63.6
GTEX-S32W-1226-SM-4AD67
50-59 years, female
62.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
62.4
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
61.5
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
61.3
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
61.0
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
60.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
58.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
57.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
55.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
54.6
GTEX-Q734-0726-SM-48TZP
40-49 years, female
52.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
50.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
49.8
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
48.2
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
47.7
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
44.1
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
43.6
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
38.9
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
38.0
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
33.4
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
33.3
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.