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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 239.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 533.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 106.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 358.5
Min RPKM: 26.3
Std RPKM: 65.5
Median RPKM: 88.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
358.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
317.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
301.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
283.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
278.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
263.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
263.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
259.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
258.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
257.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
254.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
251.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
244.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
241.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
241.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
221.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
220.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
220.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
213.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
213.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
207.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
201.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
200.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
197.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
195.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
195.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
194.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
194.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
193.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
191.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
177.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
177.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
176.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
176.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
171.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
168.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
167.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
165.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
163.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
163.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
162.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
162.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
161.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
161.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
157.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
156.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
155.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
155.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
154.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
150.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
147.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
145.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
145.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
142.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
140.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
133.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
133.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
132.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
131.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
131.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
131.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
131.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
130.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
129.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
127.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
127.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
127.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
123.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
123.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
122.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
120.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
116.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
115.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
115.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
113.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
112.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
111.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
111.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
110.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
108.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
107.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
107.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
106.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
106.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
105.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
105.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
105.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
104.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
104.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
103.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
100.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
100.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
100.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
99.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
98.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
97.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
96.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
95.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
94.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
93.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
93.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
92.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
92.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
92.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
91.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
91.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
88.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
87.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
87.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
87.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
86.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
84.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
84.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
84.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
82.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
82.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
81.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
80.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
79.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
79.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
78.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
78.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
77.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
77.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
77.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
77.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
76.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
76.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
76.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
74.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
73.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
73.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
71.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
70.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
70.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
68.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
68.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
67.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
67.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
66.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
66.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
65.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
65.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
64.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
63.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
63.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
62.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
62.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
62.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
61.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
61.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
61.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
61.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
60.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
60.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
60.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
60.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
59.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
59.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
59.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
59.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
58.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
58.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
57.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
57.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
57.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
56.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
56.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
55.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
55.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
55.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
55.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
54.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
54.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
53.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
53.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
53.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
52.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
52.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
52.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
51.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
51.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
49.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
48.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
47.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
46.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
46.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
46.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
46.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
46.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
46.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
45.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
45.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
45.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
45.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
43.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
43.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
42.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
42.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
41.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
41.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
39.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
38.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
38.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
37.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
37.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
37.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
36.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
36.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
31.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
29.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
29.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
26.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
26.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.