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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 682.4
Min RPKM: 68.4
Std RPKM: 143.3
Median RPKM: 354.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
682.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
664.8
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
608.1
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
567.6
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
558.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
556.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
550.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
549.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
542.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
537.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
536.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
525.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
524.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
519.4
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
511.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
505.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
497.7
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
490.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
489.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
469.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
463.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
459.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
452.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
435.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
434.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
433.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
432.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
424.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
423.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
416.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
410.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
410.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
409.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
408.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
403.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
402.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
401.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
398.6
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
395.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
389.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
386.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
384.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
375.7
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
375.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
373.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
367.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
357.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
351.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
341.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
333.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
332.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
314.4
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
312.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
307.8
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
302.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
300.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
298.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
293.7
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
291.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
290.9
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
286.6
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
281.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
279.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
279.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
269.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
266.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
259.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
248.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
248.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
247.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
245.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
238.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
236.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
234.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
228.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
208.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
205.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
201.8
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
182.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
178.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
167.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
165.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
160.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
155.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
144.1
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
143.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
127.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
112.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
108.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
105.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
97.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
92.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
81.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
68.4
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.