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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 386.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 971.5
Min RPKM: 279.8
Std RPKM: 143.6
Median RPKM: 699.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
971.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
970.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
956.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
935.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
924.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
892.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
886.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
884.7
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
877.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
866.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
858.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
854.8
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
850.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
845.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
839.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
836.7
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
829.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
828.2
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
825.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
824.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
823.2
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
823.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
818.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
808.6
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
805.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
804.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
803.2
GTEX-1128S-2726-SM-5H12C
60-69 years, female
789.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
782.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
780.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
775.5
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
768.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
768.5
GTEX-11PRG-2926-SM-5987A
50-59 years, male
760.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
759.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
753.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
749.0
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
743.1
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
739.2
GTEX-11GSP-3226-SM-5986O
60-69 years, female
738.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
738.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
736.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
732.1
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
731.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
730.9
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
728.3
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
727.3
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
719.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
719.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
715.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
714.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
709.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
705.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
704.8
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
702.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
700.7
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
700.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
699.0
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
698.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
696.9
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
695.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
694.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
692.4
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
690.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
688.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
682.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
679.2
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
669.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
664.0
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
660.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
651.3
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
651.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
645.1
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
640.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
635.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
634.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
631.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
630.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
624.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
623.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
620.6
GTEX-144FL-3026-SM-5O99C
50-59 years, male
619.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
615.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
614.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
612.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
607.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
605.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
598.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
595.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
587.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
581.2
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
570.7
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
552.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
549.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
548.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
520.6
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
517.4
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
516.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
500.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
495.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
489.9
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
481.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
461.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
460.2
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
439.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
436.8
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
436.5
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
426.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
423.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
393.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
391.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
379.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
367.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
279.8
Show all
Brain - Frontal Cortex (BA9) RPKM: 597.3
Samples: 108
Max RPKM: 1063.8
Min RPKM: 248.4
Std RPKM: 147.5
Median RPKM: 614.0
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
1063.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
940.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
902.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
858.3
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
858.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
837.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
830.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
795.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
769.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
767.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
762.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
756.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
753.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
749.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
748.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
743.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
739.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
735.9
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
718.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
710.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
709.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
709.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
707.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
705.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
700.8
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
700.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
698.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
695.2
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
693.1
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
690.9
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
690.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
687.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
683.4
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
676.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
671.8
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
659.3
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
657.5
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
656.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
652.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
644.9
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
639.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
638.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
636.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
635.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
635.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
634.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
632.9
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
629.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
626.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
624.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
618.2
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
617.5
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
615.6
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
614.1
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
613.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
611.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
610.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
601.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
600.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
582.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
582.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
573.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
569.3
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
568.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
568.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
567.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
564.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
560.3
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
553.6
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
549.7
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
549.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
548.5
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
543.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
532.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
530.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
529.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
523.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
510.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
509.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
506.0
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
502.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
499.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
498.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
487.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
484.8
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
477.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
474.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
461.9
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
450.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
448.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
426.3
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
415.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
413.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
408.4
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
403.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
401.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
399.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
395.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
382.9
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
381.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
375.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
364.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
364.2
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
358.0
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
310.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
309.6
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
273.6
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
248.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.