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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1055.5
Min RPKM: 202.6
Std RPKM: 196.7
Median RPKM: 647.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
1055.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
1053.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
994.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
993.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
910.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
903.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
877.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
875.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
868.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
865.7
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
864.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
850.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
846.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
841.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
837.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
827.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
825.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
822.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
818.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
810.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
809.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
802.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
801.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
801.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
796.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
793.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
790.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
783.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
780.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
775.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
773.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
771.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
769.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
760.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
757.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
756.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
750.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
747.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
743.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
742.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
740.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
737.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
732.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
727.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
715.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
715.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
712.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
712.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
711.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
706.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
693.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
691.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
689.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
689.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
681.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
676.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
663.3
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
660.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
647.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
637.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
637.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
632.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
628.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
626.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
622.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
615.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
614.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
614.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
612.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
605.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
584.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
581.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
561.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
532.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
528.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
518.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
516.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
514.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
508.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
508.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
497.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
495.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
487.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
486.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
480.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
472.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
471.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
457.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
433.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
431.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
428.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
426.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
418.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
417.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
409.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
406.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
396.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
396.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
389.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
381.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
380.0
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
375.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
366.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
366.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
353.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
349.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
341.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
326.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
317.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
312.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
310.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
294.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
293.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
272.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
269.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
247.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
202.6
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.