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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 607.7
Min RPKM: 68.3
Std RPKM: 104.0
Median RPKM: 201.9
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
607.7
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
480.2
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
472.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
453.6
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
400.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
391.5
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
390.1
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
382.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
378.9
GTEX-P78B-1926-SM-3P616
40-49 years, female
376.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
370.7
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
363.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
345.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
340.3
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
340.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
321.2
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
319.3
GTEX-S341-0726-SM-4AD5R
40-49 years, female
310.7
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
300.1
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
296.9
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
296.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
286.7
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
279.1
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
277.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
275.6
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
271.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
270.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
267.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
258.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
255.2
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
248.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
246.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
244.8
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
239.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
238.7
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
233.2
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
230.4
GTEX-11I78-1926-SM-59878
50-59 years, female
226.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
221.2
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
216.9
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
215.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
213.0
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
210.5
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
209.1
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
207.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
205.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
204.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
203.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
201.9
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
199.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
194.0
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
193.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
192.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
190.0
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
189.5
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
184.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
182.9
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
182.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
182.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
181.6
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
181.1
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
169.4
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
169.3
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
167.7
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
165.6
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
160.0
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
159.7
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
158.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
147.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
145.0
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
143.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
143.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
142.0
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
132.3
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
131.1
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
130.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
126.6
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
122.1
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
116.0
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
115.6
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
114.6
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
114.1
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
113.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
113.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
109.1
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
107.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
104.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
104.5
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
101.8
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
97.9
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
94.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
94.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
92.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
86.4
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
80.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
71.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
68.3
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.