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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 358.9
Min RPKM: 69.4
Std RPKM: 54.0
Median RPKM: 161.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
358.9
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
355.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
341.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
308.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
284.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
273.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
266.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
253.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
253.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
239.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
231.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
231.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
226.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
223.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
221.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
217.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
208.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
207.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
207.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
206.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
205.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
205.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
203.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
202.3
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
201.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
201.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
201.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
197.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
195.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
194.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
194.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
193.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
191.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
190.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
189.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
187.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
187.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
184.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
183.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
181.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
181.5
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
181.4
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
180.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
180.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
179.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
177.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
176.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
176.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
176.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
174.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
172.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
171.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
171.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
170.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
170.3
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
169.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
166.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
164.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
161.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
159.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
159.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
157.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
156.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
156.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
154.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
152.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
151.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
151.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
149.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
148.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
148.1
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
147.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
147.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
145.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
144.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
140.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
139.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
139.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
139.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
138.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
137.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
136.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
136.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
135.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
134.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
134.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
134.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
133.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
132.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
132.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
131.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
130.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
129.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
128.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
128.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
126.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
125.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
122.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
121.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
121.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
117.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
116.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
116.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
111.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
108.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
107.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
106.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
101.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
101.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
98.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
97.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
94.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
92.1
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
80.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
75.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
72.9
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
69.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.