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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 493.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 101.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 137.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 479.1
Min RPKM: 21.3
Std RPKM: 54.6
Median RPKM: 107.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
479.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
309.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
262.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
260.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
239.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
235.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
231.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
230.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
230.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
228.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
213.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
211.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
209.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
208.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
206.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
191.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
186.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
182.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
182.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
180.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
177.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
177.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
173.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
172.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
168.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
168.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
166.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
164.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
163.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
163.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
163.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
162.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
160.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
160.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
159.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
156.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
155.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
154.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
154.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
153.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
152.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
151.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
151.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
149.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
147.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
147.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
146.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
145.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
143.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
143.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
141.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
141.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
139.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
139.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
139.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
138.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
138.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
137.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
136.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
135.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
134.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
134.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
133.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
130.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
129.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
127.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
127.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
126.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
126.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
126.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
126.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
126.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
125.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
124.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
123.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
121.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
121.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
120.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
120.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
120.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
119.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
119.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
119.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
119.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
118.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
118.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
118.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
117.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
115.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
115.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
115.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
115.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
114.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
114.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
114.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
114.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
113.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
113.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
113.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
112.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
112.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
112.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
112.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
108.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
108.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
107.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
107.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
107.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
107.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
107.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
106.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
105.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
105.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
104.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
104.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
103.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
103.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
102.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
102.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
99.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
99.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
98.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
97.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
97.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
97.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
97.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
96.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
96.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
96.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
96.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
96.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
96.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
95.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
94.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
94.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
93.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
93.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
93.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
91.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
91.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
90.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
90.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
90.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
90.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
89.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
89.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
87.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
86.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
85.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
84.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
84.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
83.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
83.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
83.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
83.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
82.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
81.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
80.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
79.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
78.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
78.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
78.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
78.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
78.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
77.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
77.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
76.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
76.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
75.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
74.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
73.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
72.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
72.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
72.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
72.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
71.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
71.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
71.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
71.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
71.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
70.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
70.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
69.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
68.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
68.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
66.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
64.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
63.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
63.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
63.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
62.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
59.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
58.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
58.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
56.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
55.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
55.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
52.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
51.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
50.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
47.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
43.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
43.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
41.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
41.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
41.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
40.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
37.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
36.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
36.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
35.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
26.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
25.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
21.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.