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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 384.2
Min RPKM: 43.4
Std RPKM: 59.6
Median RPKM: 125.4
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
384.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
311.4
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
310.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
299.1
GTEX-PX3G-0926-SM-48U12
20-29 years, female
288.2
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
287.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
252.7
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
241.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
226.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
216.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
212.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
209.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
203.9
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
196.0
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
191.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
191.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
188.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
186.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
183.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
178.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
175.3
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
175.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
172.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
170.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
169.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
168.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
163.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
161.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
161.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
161.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
159.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
158.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
156.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
152.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
150.6
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
146.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
145.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
143.2
GTEX-Q734-0226-SM-48U1A
40-49 years, female
142.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
142.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
141.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
138.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
138.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
137.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
137.5
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
135.2
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
134.3
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
133.1
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
132.4
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
129.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
128.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
126.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
124.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
124.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
122.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
122.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
121.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
121.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
121.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
121.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
121.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
118.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
117.0
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
116.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
116.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
115.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
115.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
114.4
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
112.6
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
110.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
108.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
105.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
105.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
103.5
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
103.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
103.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
102.3
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
102.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
101.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
101.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
98.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
98.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
97.7
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
97.6
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
97.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
95.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
94.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
94.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
93.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
90.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
88.8
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
87.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
87.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
84.7
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
83.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
81.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
79.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
78.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
77.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
73.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
61.9
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
52.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
52.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
43.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.