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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 474.5
Min RPKM: 107.3
Std RPKM: 62.4
Median RPKM: 241.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
474.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
453.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
424.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
394.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
350.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
349.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
331.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
327.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
327.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
325.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
325.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
318.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
317.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
317.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
317.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
309.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
307.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
300.2
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
299.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
299.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
291.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
287.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
285.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
283.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
283.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
280.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
278.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
277.1
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
270.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
269.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
264.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
264.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
264.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
263.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
262.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
262.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
260.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
259.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
258.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
258.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
257.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
256.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
256.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
254.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
253.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
251.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
249.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
247.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
247.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
246.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
246.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
244.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
244.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
243.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
242.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
242.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
241.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
241.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
241.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
239.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
239.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
239.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
238.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
237.7
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
237.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
235.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
234.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
231.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
227.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
227.5
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
226.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
226.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
225.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
225.0
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
224.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
223.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
221.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
221.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
219.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
216.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
216.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
215.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
214.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
214.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
213.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
211.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
208.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
208.1
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
207.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
207.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
204.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
199.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
196.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
194.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
193.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
192.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
189.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
189.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
187.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
187.1
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
183.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
183.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
182.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
179.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
175.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
174.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
172.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
167.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
160.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
158.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
150.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
150.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
130.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
120.0
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
117.9
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
110.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
107.3
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.