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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 226.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 201
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 192.8
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 229.7
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 243.8
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 215.1
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 316.1
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 268.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 269.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 189.1
Min RPKM: 80.3
Std RPKM: 21.0
Median RPKM: 129.3
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
189.1
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
183.7
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
173.4
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
172.4
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
167.9
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
166.8
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
165.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
165.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
164.9
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
164.3
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
164.2
GTEX-11DXZ-2126-SM-59881
50-59 years, male
163.8
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
163.4
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
163.1
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
162.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
160.4
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
157.8
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
157.4
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
154.7
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
154.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
154.3
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
153.8
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
152.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
150.7
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
150.7
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
150.1
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
150.1
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
149.0
GTEX-Y111-2426-SM-4TT23
50-59 years, male
147.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
146.4
GTEX-13112-0226-SM-5P9IV
50-59 years, male
146.4
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
145.9
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
145.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
145.6
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
145.5
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
145.4
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
145.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
144.6
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
144.0
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
143.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
143.9
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
143.7
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
143.5
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
143.1
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
142.9
GTEX-R55D-0126-SM-48FEL
50-59 years, male
141.8
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
141.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
141.3
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
140.8
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
140.2
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
140.1
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
139.4
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
139.2
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
137.8
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
137.8
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
137.7
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
137.3
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
137.2
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
137.0
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
136.6
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
136.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
135.8
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
135.6
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
135.6
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
135.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
135.5
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
135.4
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
135.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
134.9
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
134.7
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
134.6
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
134.5
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
134.2
GTEX-12696-0226-SM-5EGL3
60-69 years, male
133.9
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
133.5
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
133.1
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
132.3
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
132.2
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
132.0
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
131.9
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
131.4
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
130.9
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
130.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
130.5
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
129.9
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
129.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
129.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
128.8
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
128.6
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
128.2
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
127.9
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
126.5
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
126.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
124.7
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
124.3
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
124.1
GTEX-13111-1526-SM-5EGJX
50-59 years, male
124.1
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
123.2
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
122.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
122.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
122.7
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
122.0
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
121.6
GTEX-R55C-1426-SM-48FED
40-49 years, male
120.9
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
120.7
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
120.1
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
119.9
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
119.6
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
119.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
118.7
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
118.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
118.6
GTEX-S95S-1126-SM-4B64E
60-69 years, male
118.4
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
117.7
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
117.6
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
116.9
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
116.8
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
116.7
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
116.6
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
116.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
116.3
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
116.3
GTEX-X261-2326-SM-4PQYU
50-59 years, male
116.3
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
115.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
115.1
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
114.6
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
113.8
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
113.8
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
113.6
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
113.1
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
113.0
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
113.0
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
112.9
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
112.7
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
112.5
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
111.8
GTEX-V955-1926-SM-4KL1L
60-69 years, male
110.4
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
110.0
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
110.0
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
109.7
GTEX-QLQW-1026-SM-447A9
30-39 years, male
109.2
GTEX-S33H-0126-SM-4AD62
30-39 years, male
109.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
108.2
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
107.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
107.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
107.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
107.0
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
106.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
106.6
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
106.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
106.2
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
104.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
103.9
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
103.7
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
103.3
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
103.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
102.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
102.0
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
98.5
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
98.2
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
97.4
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
97.4
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
95.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
93.8
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
90.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
90.3
GTEX-RN64-2326-SM-48FDW
50-59 years, male
90.1
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
89.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
88.6
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
87.7
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
87.1
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
80.3
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.