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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 115.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 71.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 53
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1682.4
Min RPKM: 26.2
Std RPKM: 305.5
Median RPKM: 327.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
1682.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1529.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
1521.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1406.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1283.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1230.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
1144.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
1126.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1122.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
946.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
941.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
935.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
930.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
910.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
880.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
878.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
877.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
875.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
869.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
865.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
854.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
822.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
820.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
810.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
799.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
799.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
797.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
785.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
784.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
774.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
773.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
755.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
753.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
752.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
729.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
719.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
715.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
701.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
690.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
681.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
655.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
644.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
629.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
619.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
617.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
611.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
607.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
597.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
591.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
580.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
579.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
578.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
576.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
561.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
538.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
526.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
517.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
503.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
498.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
494.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
493.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
492.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
486.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
478.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
477.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
471.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
458.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
456.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
453.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
451.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
441.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
441.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
438.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
435.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
434.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
432.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
428.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
424.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
418.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
414.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
411.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
407.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
404.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
402.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
399.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
394.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
393.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
389.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
386.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
384.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
384.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
384.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
382.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
382.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
376.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
366.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
364.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
356.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
356.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
355.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
355.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
352.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
350.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
341.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
332.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
332.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
330.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
324.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
324.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
315.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
314.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
313.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
309.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
304.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
303.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
299.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
297.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
280.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
277.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
272.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
267.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
266.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
262.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
261.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
261.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
260.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
258.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
257.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
256.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
255.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
251.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
251.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
251.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
251.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
249.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
248.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
237.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
233.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
232.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
231.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
230.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
229.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
228.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
228.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
227.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
219.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
219.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
218.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
218.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
218.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
215.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
213.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
212.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
209.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
200.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
195.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
194.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
193.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
193.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
190.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
189.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
188.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
188.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
187.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
183.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
179.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
179.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
178.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
178.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
172.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
170.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
163.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
161.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
157.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
153.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
152.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
151.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
151.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
150.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
150.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
148.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
147.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
146.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
143.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
141.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
135.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
133.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
132.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
132.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
130.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
125.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
122.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
119.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
115.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
112.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
108.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
106.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
103.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
100.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
92.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
90.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
89.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
86.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
79.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
65.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
65.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
64.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
60.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
58.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
45.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
41.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
37.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
27.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
26.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.