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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 189.3
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 152.3
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 112.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 157
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 145.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 172.6
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 129.2
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 184.7
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 176.1
Min RPKM: 22.6
Std RPKM: 26.9
Median RPKM: 88.2
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
176.1
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
174.3
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
164.1
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
156.7
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
154.8
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
146.2
GTEX-S32W-1926-SM-4AD63
50-59 years, female
144.1
GTEX-P78B-1326-SM-3P611
40-49 years, female
140.7
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
138.0
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
135.5
GTEX-QEL4-1226-SM-447A4
50-59 years, male
123.8
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
123.4
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
122.4
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
121.8
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
119.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
116.9
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
116.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
116.6
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
115.0
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
114.9
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
113.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
113.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
111.4
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
110.7
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
110.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
110.5
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
109.6
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
109.4
GTEX-13113-1326-SM-5GCOI
60-69 years, female
108.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
107.8
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
107.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
107.1
GTEX-Q734-0326-SM-48U15
40-49 years, female
107.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
106.9
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
106.5
GTEX-R53T-0326-SM-48FEC
50-59 years, female
106.1
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
106.0
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
105.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
105.0
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
104.5
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
103.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
102.9
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
102.1
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
100.9
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
100.6
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
100.1
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
99.9
GTEX-S33H-1626-SM-4AD68
30-39 years, male
99.9
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
99.4
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
99.3
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
98.8
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
98.0
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
96.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
96.2
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
94.6
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
93.7
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
93.2
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
89.2
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
89.1
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
88.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
87.8
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
87.0
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
86.8
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
86.1
GTEX-1399T-0826-SM-5IFES
60-69 years, male
86.0
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
85.8
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
85.4
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
84.3
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
83.9
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
83.2
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
83.1
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
81.4
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
80.4
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
80.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
80.0
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
79.9
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
79.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
78.9
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
78.3
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
78.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
77.6
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
77.5
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
77.3
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
77.2
GTEX-X261-1726-SM-4PQYT
50-59 years, male
77.2
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
76.7
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
75.5
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
75.4
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
74.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
74.7
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
74.5
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
74.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
74.3
GTEX-RN64-1826-SM-48FDV
50-59 years, male
71.6
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
70.4
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
69.4
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
69.0
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
69.0
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
67.8
GTEX-YECK-1926-SM-4W21H
60-69 years, male
67.8
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
67.6
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
66.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
66.8
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
65.8
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
64.7
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
64.1
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
63.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
63.1
GTEX-11ZUS-2526-SM-59872
30-39 years, male
62.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
61.2
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
59.4
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
57.8
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
56.5
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
54.7
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
50.1
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
50.0
GTEX-11GSP-0626-SM-5986T
60-69 years, female
49.2
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
46.2
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
22.6
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
