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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 244.3
Min RPKM: 0.0
Std RPKM: 57.7
Median RPKM: 61.8
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
244.3
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
234.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
215.0
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
200.1
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
171.6
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
157.8
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
152.8
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
152.8
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
150.4
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
148.6
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
148.5
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
145.9
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
137.6
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
136.8
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
132.3
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
123.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
121.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
119.4
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
118.1
GTEX-11I78-2026-SM-5987C
50-59 years, female
113.7
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
106.6
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
103.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
102.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
99.9
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
98.8
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
93.7
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
91.9
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
90.9
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
87.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
87.2
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
86.7
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
85.5
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
84.5
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
84.4
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
83.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
82.6
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
82.0
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
81.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
80.1
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
78.7
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
78.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
77.3
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
76.6
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
73.9
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
71.6
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
68.7
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
66.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
63.1
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
60.5
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
60.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
59.3
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
58.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
54.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
53.8
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
49.2
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
48.5
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
47.2
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
45.4
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
45.2
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
43.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
43.6
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
43.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
42.3
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
39.5
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
35.2
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
31.8
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
29.6
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
24.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
19.5
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
18.9
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
15.3
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
13.4
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
12.4
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
11.8
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
11.1
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
4.8
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
4.0
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
3.1
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
2.6
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
2.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
1.3
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
1.3
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
1.2
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
1.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
1.0
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
1.0
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
1.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
0.6
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.6
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.5
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.3
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
0.2
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.2
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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