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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 138.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 150.9
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 189.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 120.4
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 108.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 125.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 92.5
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 196.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 261.6
Min RPKM: 3.8
Std RPKM: 41.6
Median RPKM: 44.3
GTEX-QEL4-1226-SM-447A4
50-59 years, male
261.6
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
194.7
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
177.2
GTEX-QESD-2026-SM-447BI
20-29 years, male
153.6
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
147.9
GTEX-Q734-0326-SM-48U15
40-49 years, female
142.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
116.3
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
111.5
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
107.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
106.8
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
104.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
103.2
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
101.0
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
100.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
97.5
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
97.1
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
96.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
94.6
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
92.3
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
91.5
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
91.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
91.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
89.6
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
88.7
GTEX-13112-1426-SM-5EGH8
50-59 years, male
83.9
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
81.9
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
81.7
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
79.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
79.5
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
77.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
76.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
76.1
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
75.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
71.7
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
70.5
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
70.2
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
68.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
68.3
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
67.0
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
65.8
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
62.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
62.1
GTEX-YECK-1926-SM-4W21H
60-69 years, male
62.1
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
61.2
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
60.2
GTEX-11GSP-0626-SM-5986T
60-69 years, female
58.2
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
58.1
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
58.0
GTEX-RN64-1826-SM-48FDV
50-59 years, male
57.8
GTEX-R53T-0326-SM-48FEC
50-59 years, female
55.5
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
55.2
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
52.6
GTEX-1399T-0826-SM-5IFES
60-69 years, male
50.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
49.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
48.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
46.1
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
45.4
GTEX-S32W-1926-SM-4AD63
50-59 years, female
45.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
44.5
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
44.3
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
43.0
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
42.8
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
42.1
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
40.7
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
40.6
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
40.2
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
39.4
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
39.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
37.7
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
37.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
37.3
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
36.9
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
36.8
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
35.8
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
33.9
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
31.6
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
31.5
GTEX-P78B-1326-SM-3P611
40-49 years, female
31.4
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
30.6
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
30.5
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
30.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
29.9
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
29.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
29.7
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
29.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
29.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
28.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
28.5
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
26.6
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
25.3
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
24.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
23.7
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
23.5
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
23.2
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
22.3
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
22.1
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
21.9
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
21.4
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
20.4
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
20.1
GTEX-12696-0826-SM-5EGGE
60-69 years, male
19.5
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
18.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
17.4
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
17.0
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
16.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
13.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
13.5
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
13.0
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
12.7
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
12.5
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
11.6
GTEX-S33H-1626-SM-4AD68
30-39 years, male
11.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
11.0
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
10.9
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
9.4
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
9.3
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
6.6
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
6.0
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
3.8
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
