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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 266.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 355
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 112.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 377.1
Min RPKM: 31.1
Std RPKM: 44.1
Median RPKM: 71.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
377.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
352.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
273.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
191.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
190.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
189.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
176.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
171.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
165.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
158.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
153.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
152.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
147.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
147.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
143.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
139.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
137.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
134.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
133.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
133.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
130.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
124.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
124.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
122.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
120.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
119.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
119.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
118.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
118.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
114.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
114.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
113.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
112.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
111.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
111.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
106.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
104.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
104.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
102.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
101.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
99.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
97.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
96.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
96.4
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
93.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
92.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
92.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
92.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
92.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
91.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
88.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
87.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
87.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
86.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
85.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
85.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
85.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
85.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
84.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
84.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
84.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
84.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
84.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
84.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
82.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
82.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
82.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
82.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
82.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
81.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
81.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
81.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
81.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
81.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
81.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
81.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
80.2
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
79.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
79.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
79.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
79.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
78.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
78.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
78.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
78.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
78.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
77.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
77.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
77.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
77.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
77.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
76.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
76.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
75.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
75.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
75.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
75.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
74.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
74.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
74.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
74.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
74.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
74.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
73.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
72.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
72.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
71.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
71.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
70.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
70.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
69.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
69.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
69.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
69.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
68.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
68.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
68.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
68.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
68.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
67.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
67.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
67.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
66.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
66.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
66.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
66.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
66.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
66.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
65.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
64.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
64.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
64.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
64.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
63.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
63.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
63.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
62.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
62.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
62.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
62.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
61.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
60.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
60.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
60.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
60.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
59.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
59.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
58.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
57.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
57.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
56.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
56.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
56.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
56.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
56.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
55.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
55.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
54.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
54.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
53.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
53.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
53.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
53.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
52.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
52.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
52.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
52.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
52.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
52.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
51.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
51.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
51.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
51.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
49.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
49.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
49.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
49.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
49.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
48.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
48.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
48.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
48.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
47.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
47.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
47.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
47.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
47.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
46.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
46.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
45.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
45.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
45.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
45.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
45.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
45.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
44.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
44.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
43.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
43.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
43.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
42.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
42.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
42.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
41.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
40.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
40.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
40.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
39.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
37.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
37.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
35.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
33.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
33.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
31.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.