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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 479.5
Min RPKM: 173.0
Std RPKM: 66.1
Median RPKM: 298.0
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
479.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
466.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
461.9
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
413.5
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
412.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
408.3
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
404.9
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
399.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
395.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
393.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
391.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
391.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
390.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
389.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
384.9
GTEX-QV31-0126-SM-447BP
30-39 years, male
384.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
382.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
378.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
376.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
367.9
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
364.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
358.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
358.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
358.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
354.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
354.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
354.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
350.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
347.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
345.0
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
343.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
336.6
GTEX-144GN-2126-SM-5O99D
50-59 years, male
336.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
333.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
331.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
331.4
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
326.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
325.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
325.2
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
322.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
321.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
318.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
318.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
315.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
315.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
313.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
309.2
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
306.2
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
305.7
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
303.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
299.6
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
299.3
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
296.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
296.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
294.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
293.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
290.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
290.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
290.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
289.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
287.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
287.2
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
281.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
281.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
281.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
280.3
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
279.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
279.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
278.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
275.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
274.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
269.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
268.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
266.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
265.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
263.3
GTEX-13111-0126-SM-5EGHO
50-59 years, male
259.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
258.7
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
258.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
257.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
255.9
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
254.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
248.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
248.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
247.0
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
246.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
241.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
239.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
237.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
237.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
235.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
228.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
224.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
219.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
214.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
211.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
207.5
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
205.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
197.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
188.4
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
182.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
179.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
177.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
173.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.