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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 883.3
Min RPKM: 276.2
Std RPKM: 101.2
Median RPKM: 493.2
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
883.3
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
714.4
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
702.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
701.7
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
681.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
665.9
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
663.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
657.0
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
650.6
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
646.4
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
645.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
644.4
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
644.1
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
642.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
614.8
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
612.3
GTEX-RU72-2226-SM-46MUE
50-59 years, female
605.4
GTEX-P78B-1926-SM-3P616
40-49 years, female
598.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
597.3
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
597.2
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
591.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
588.6
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
577.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
575.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
573.4
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
566.3
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
560.1
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
559.8
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
547.8
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
543.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
538.1
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
533.2
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
526.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
525.2
GTEX-11I78-1926-SM-59878
50-59 years, female
523.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
517.6
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
514.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
514.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
511.3
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
507.7
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
507.6
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
506.9
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
506.2
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
501.2
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
500.5
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
498.5
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
497.7
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
495.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
493.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
485.5
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
484.3
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
483.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
482.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
482.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
479.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
479.1
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
477.2
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
475.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
474.0
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
466.1
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
464.5
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
464.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
459.1
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
458.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
452.8
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
452.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
447.5
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
447.5
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
446.7
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
446.0
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
445.9
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
444.0
GTEX-S341-0726-SM-4AD5R
40-49 years, female
437.7
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
436.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
434.2
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
430.4
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
429.6
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
423.7
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
423.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
421.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
418.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
416.0
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
415.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
412.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
409.7
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
399.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
397.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
387.3
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
384.0
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
381.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
379.6
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
359.1
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
347.6
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
344.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
342.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
308.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
276.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.